summary.nebpath.Rd
`print.nebpath` prints the list minima for Nudged Elastic Band, activation energies and half lives calculated by Eyring equation (https://doi.org/10.1063/1.1749604).
# S3 method for nebpath
summary(object, temp = 300, eunit = "kJ/mol", ...)
nebpath object.
temperature in Kelvins.
energy units (kJ/mol or kcal/mol, kJ/mol is default).
further arguments passed to or from other methods.
tfes<-fes(acealanme, imax=5000)
minima<-fesminima(tfes)
nebAD<-neb(minima, min1="A", min2="D", nsteps=20)
summary(nebAD)
#> path between minima:
#> letter CV1bin CV2bin CV1 CV2 free_energy
#> 1 A 79 235 -1.219677 2.624154 -58.22765
#> letter CV1bin CV2bin CV1 CV2 free_energy
#> 4 D 166 153 0.9239978 0.6036786 -54.17444
#> with kinetics
#> direction deltag halflife units
#> 1 -> 25.07136 2.571014 ns
#> 2 <- 21.01814 506.279375 ps