Plot points for Nudged Elastic Band — points.nebpath • metadynminer

`points.nebpath` plots points for free energy profile calculated by Nudged Elastic Band.

# S3 method for nebpath
points(x, pch = NULL, cex = 1, bg = NULL,
  col = "red", lwd = 1, ...)

Arguments

x: nebpath object.
pch: plotting 'character', i.e., symbol to use. See 'points'.
cex: character (or symbol) expansion: a numerical vector. This works as a multiple of 'par("cex")'.
bg: background (fill) color for the open plot symbols given by 'pch = 21:25'.
col: color code or name, see 'par'.
lwd: line width for drawing symbols see 'par'.
...: further arguments passed to or from other methods.

tfes<-fes(acealanme, imax=5000)
minima<-fesminima(tfes)
nebAD<-neb(minima, min1="A", min2="D", nsteps=20)
plot(nebAD)
points(nebAD)