Plot hillsfile object

`plot.hillsfile` plots hillsfile object. For a hillsfile with one collective variable it plots its evolution. For a hillsfile with two collective variables it plots CV1 vs. CV2.

# S3 method for hillsfile
plot(x, ignoretime = FALSE, xlab = NULL,
  ylab = NULL, xlim = NULL, ylim = NULL, main = NULL, sub = NULL,
  pch = 1, col = "black", bg = "red", cex = 1, asp = NULL,
  lwd = 1, axes = TRUE, ...)

Arguments

x

hillsfile object.

ignoretime

time in the first column of the HILLS file will be ignored.

xlab

a title for the x axis: see 'title'.

ylab

a title for the y axis: see 'title'.

xlim

numeric vector of length 2, giving the x coordinates range.

ylim

numeric vector of length 2, giving the y coordinates range.

main

an overall title for the plot: see 'title'.

sub

a sub title for the plot: see 'title'.

pch

plotting 'character', i.e., symbol to use. See 'points'.

col

color code or name, see 'par'.

bg

background (fill) color for the open plot symbols given by 'pch = 21:25'.

cex

character (or symbol) expansion: a numerical vector. This works as a multiple of 'par("cex")'.

asp

the y/x aspect ratio, see 'plot.window'.

lwd

line width for drawing symbols see 'par'.

axes

a logical value indicating whether both axes should be drawn on the plot.

...

further arguments passed to or from other methods.

Examples

plot(acealanme)